Publications

Journal papers

  1. M. Durmaz, N. Tulluk, R. Aksoy, H. B. Yilmaz, B. Yang, A. Wipat, A. E. Pusane, G. Misirli, T. Tugcu, "BioRxToolbox: A computational framework to streamline genetic circuit design in molecular data communications," Synthetic Biology, accepted for publication

  2. A. Kamber, H. B. Yilmaz, A. E. Pusane, and T. Tugcu, "Half-space modeling with reflecting surface in molecular communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, accepted for publication

  3. M. Y. Yagan, S. Kesir, İ. Hokelek, A. E. Pusane, and A. Gorcin, "Multi-user directional modulation with reconfigurable holographic surfaces," EURASIP Journal on Wireless Communications and Networking, vol. 2024, July 2024

  4. J. Angjo, A. E. Pusane, H. B. Yilmaz, E. Basar, and T. Tugcu, "Molecular beamforming for actuation in molecular communication networks," IEEE Transactions on NanoBioscience, vol. 23, no. 1, pp. 148-156, January 2024

  5. U. E. Usturali, B. C. Akdeniz, T. Tugcu, and A. E. Pusane, “Low-complexity timing methods for molecular communication via diffusion,” IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 9, no. 4, pp. 478 - 482, December 2023

  6. G. Yaylalı, B. C. Akdeniz, T. Tugcu, and A. E. Pusane, "Channel modeling for multi-receiver molecular communication systems," IEEE Transactions on Communications, vol. 71, no. 8, pp. 4499 - 4512, August 2023

  7. M. Ö. Demir, G. Karabulut Kurt, and A. E. Pusane, "A pseudorange-based GPS spoofing detection using hyperbola equations," IEEE Transactions on Vehicular Technology, vol. 72, no. 8, pp. 10770 - 10783, August 2023

  8. A. Zeshan, A. E. Pusane, and T. Baykas, “An integrated molecular communication system based on acoustic tweezers,” IEEE Transactions on NanoBioscience, vol. 22, no. 2, pp. 413-419, April 2023

  9. M. Pourmandi, A. E. Pusane, S. S. Arslan, and E. Haytaoglu, “Minimum repair bandwidth LDPC codes for distributed storage systems,” IEEE Communications Letters, vol. 27, no. 2, pp. 428-432, February 2023

  10. O. Kara, G. Yaylali, A. E. Pusane, and T. Tugcu, "Molecular index modulation using convolutional neural networks," Nano Communication Networks, vol. 34, December 2022

  11. J. Angjo, A. E. Pusane, H. B. Yilmaz, E. Basar, and T. Tugcu, "Asymmetrical relaying in molecular communications," IEEE Transactions on NanoBioscience, vol. 21, no. 4, pp. 570-574, October 2022

  12. J. Angjo, A. E. Pusane, H. B. Yilmaz, E. Basar, and T. Tugcu, "Optimal relaying in molecular communications," Nano Communication Networks, vol. 32, June 2022

  13. R. Kisacik, M. Y. Yagan, M. Uysal, A. E. Pusane, T. Baykas, G. Dundar, and A. D. Yalcinkaya, "A 130 nm CMOS receiver for visible light communication," IEEE/OSA Journal of Lightwave Technology, vol. 40, no. 12, pp. 3681-3687, June 2022

  14. O. Yetimoglu, M. K. Avci, B. C.  Akdeniz, H. B. Yilmaz, A. E. Pusane, and T. Tugcu, “Multiple transmitter localization via single receiver in 3-D molecular communication via diffusion,” Digital Signal Processing, vol. 124, May 2022

  15. B. Kabakulak, Z. C. Taşkın, and A. E. Pusane, “A branch-cut-and-price algorithm for optimal decoding in digital communication systems,” Journal of Global Optimization, vol. 81, pp. 805-834, November 2021

  16. E. Oncu, H. U. Ozdemir, H. I. Orhan, B. C. Akdeniz, A. Toprakci, A. Aslihak, H. B. Yilmaz, A. E. Pusane, T. Tugcu, and F. Dinc, "Analytical investigation of long-time diffusion dynamics in a synaptic channel with glial cells," IEEE Communications Letters, vol. 25, no. 11, pp. 3444-3448, November 2021

  17. B. Koo, C. Lee, A. E. Pusane, T. Tugcu, and C.-B. Chae, "MIMO operations in molecular communications: Theory, prototypes, and open challenges," IEEE Communications Magazine, vol. 59, no. 9, pp. 98-104, September 2021 

  18. R. Kisacik, M. Y. Yagan, M. Uysal, A. E. Pusane, and A. D. Yalcinkaya, "A new LED response model and its application to pre-equalization in VLC systems," IEEE Photonics Technology Letters, vol. 33, no. 17, pp. 955-958, September 2021

  19. B. Camli, O. K. Erden, O. F. Sezgen, Z. C. Canbek Ozdil, S. Dumanlı, A. E. Pusane, A. D. Yalcinkaya, and T. Tugcu, "Rapid prototyping of noncontact microwave microfluidic devices for sensing applications," Journal of Micromechanics and Microengineering, vol. 31, no. 9, August 2021

  20. E. Oral, A. Schmeink, G. Dartmann, G. Ascheid, A. E. Pusane, and G. Karabulut Kurt, "Consensus analysis of wireless multi-agent systems over fading channels," IEEE Wireless Communications Letters, vol. 10, no. 7, pp. 1528-1531, July 2021

  21. O. Sezgen, O. Altan, A. Bilir, M. G. Durmaz, N. Haciosmanoglu, B. Camli, Z. C. Canbek, A. E. Pusane, A. D. Yalçınkaya, T. Tugcu, U. O. Seker, and S. Dumanlı, “A multiscale communications system based on engineered bacteria,” IEEE Communications Magazine, vol. 59, no. 5, pp. 62-67, May 2021

  22. R. Kisacik, A. D. Yalcinkaya, A. E. Pusane, T. Baykas, and M. Uysal, “Characterization of LEDs for visible light communications,'' Optical Engineering, vol. 60, no. 2, February 2021

  23. Y. Sabucu Sandal, A. E. Pusane, G. Karabulut Kurt, and F. Benedetto, “Reputation based attacker identification policy for multi-access edge computing in Internet of things,” IEEE Transactions on Vehicular Technology, vol. 69, no. 12, pp. 15346-15356, December 2020

  24. A. O. Kışlal, B. C. Akdeniz, C. Lee, A. E. Pusane, T. Tuğcu, and C. Chae, “ISI-mitigating channel codes for molecular communication via diffusion,” IEEE Access, vol. 8, no. 1, pp. 24588-24599, December 2020

  25. M. G. Ülkar, T. Baykaş, and A. E. Pusane, “VLCnet: Deep learning based end-to-end visible light communication system,'' IEEE/OSA Journal of Lightwave Technology, vol. 38, no. 21, pp. 5937-5948, November 2020

  26. M. Ö. Demir, A. E. Pusane, G. Dartmann, G. Ascheid, and G. Karabulut Kurt, “A garden of cyber-physical systems: requirements, challenges and implementation aspects,'' IEEE Internet of Things Magazine, vol. 3, no. 3, pp. 84-89, September 2020

  27. O. A. Topal, M. Ö. Demir, Z. Liang, A. E. Pusane, G. Dartmann, G. Ascheid, and G. Karabulut Kurt, “A physical layer security framework for cognitive cyber physical systems,'' IEEE Wireless Communications, vol. 27, no. 4, pp. 32-39, August 2020

  28. M. C. Gursoy, H. B. Yılmaz, A. E. Pusane, and T. Tugcu, “Simulation study and analysis of diffusive molecular communications with an apertured plane,” IEEE Transactions on NanoBioScience, vol. 19, no. 3, pp. 468-476, July 2020

  29. M. C. Gursoy, A. Celik, E. Basar, A. E. Pusane, and T. Tugcu, “Molecular index modulation with space-time equalization,” IEEE Wireless Communications Letters, vol. 9, no. 5, pp. 702-705, May 2020

  30. O. D. Kose, M. C. Gursoy, M. Saraclar, A. E. Pusane, and T. Tugcu, “Machine learning-based silent entity localization using molecular diffusion,” IEEE Communications Letters, vol. 24, no. 4, pp. 807-810, April 2020

  31. B. Kabakulak, Z. C. Taşkın, and A. E. Pusane, “A branch-and-cut algorithm for a bipartite graph construction problem in digital communication systems,” Networks, vol. 75, no. 2, pp. 137-157, March 2020

  32. A. Sarıduman, A. E. Pusane, and Z. C. Taşkın, “On the construction of regular QC-LDPC codes with low error floor,” IEEE Communications Letters, vol. 24, no. 1, pp. 25-28, January 2020

  33. F. Gökbudak, B. C. Akdeniz, T. Tugcu, and A. E. Pusane, “Spatial receptor allocation for a multiple access hub in nanonetworks,” IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 5, no. 1, pp. 63-67, October 2019

  34. R. Ashrafi, Ş. Ş. Arslan, and A. E. Pusane, “On the distribution of the threshold voltage in multi-level cell Flash memories,” Physical Communication, vol. 36, pp. 1-7, October 2019

  35. F. Dinc, B. C. Akdeniz, A. E. Pusane, and T. Tugcu, “A general analytical approximation to impulse response of 3-D microfluidic channels in molecular communication,” IEEE Transactions on NanoBioscience, vol. 18, no. 3, pp. 396-403, July 2019

  36. E. Afacan, G. Dündar, F. Başkaya, A. E. Pusane, and M. B. Yelten, “On chip reconfigurable CMOS analog circuit design and automation against aging phenomena: Sense and react,” ACM Transactions on Design Automation of Electronic Systems, vol. 24, no. 4, June 2019

  37. F. Dinc, B. C. Akdeniz, E. Erol, D. Gokay, E. Tekgul, A. E. Pusane, and T. Tugcu, “Analytical derivation of the impulse response for the bounded 2-D diffusion channel,” Physics Letters A, vol. 383, no. 14, pp. 1589-1600, May 2019

  38. M. C. Gursoy, E. Basar, A. E. Pusane, and T. Tugcu, “Index modulation for molecular communication via diffusion systems,” IEEE Transactions on Communications, vol. 67, no. 5, pp. 1558-0857, May 2019

  39. B. Kabakulak, Z.C. Taşkın, and A. E. Pusane, “Optimization-Based Decoding Algorithms for LDPC Convolutional Codes in Communication Systems,” IISE Transactions, vol. 51, no. 10, pp. 1061-1074, April 2019

  40. A. O. Kislal, H. B. Yilmaz, A. E. Pusane, and T. Tugcu, “ISI-aware channel code design for molecular communication via diffusion,” IEEE Transactions on NanoBioscience, vol. 18, no. 2, pp. 205-213, April 2019

  41. M. C. Gursoy, E. Basar, A. E. Pusane, and T. Tugcu, “Pulse position-based spatial modulation for molecular communications,” IEEE Communications Letters, vol. 23, no. 4, pp. 596-599, April 2019

  42. Y. Sabucu, A. E. Pusane, and G. Karabulut Kurt, “Robust matching algorithms for carrier aggregated heterogeneous networks,” Physical Communication, vol. 33, pp. 123-134, April 2019

  43. M. G. Ulkar, A. E. Pusane, and T. Tuğcu, “Novel decoding methods of constant weight coding for molecular communications,” Nano Communication Networks, vol. 19, pp. 157-167, March 2019

  44. M. Turan, B. C. Akdeniz, M. S. Kuran, H. B. Yilmaz, I. Demirkol, A. E. Pusane, and T. Tugcu, “Transmitter localization in vessel-like diffusive channels using ring-shaped molecular receivers,” IEEE Communications Letters, vol. 22, no. 12, pp. 2511-2514, December 2018

  45. B. C. Akdeniz, N. Turgut, H. B. Yilmaz, C. Chae, T. Tugcu, and A. E. Pusane, “Molecular signal modeling of a partially counting absorbing spherical receiver,” IEEE Transactions on Communications, vol. 66, no. 2, pp. 6237-6246, December 2018

  46. R. Ashrafi and A. E. Pusane, “An efficient low-complexity two-dimensional equalisation technique for multi-level cell flash memory storage systems,” IET Communications, vol. 12, no. 14, pp. 1671-1677, August 2018

  47. F. Dinc, B. C. Akdeniz, A. E. Pusane, and T. Tugcu, “Impulse response of the molecular diffusion channel with a spherical absorbing receiver and a spherical reflective boundary,” IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 4, no. 2, pp. 118-122, June 2018

  48. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “Position-based modulation in molecular communications,” Nano Communication Networks, vol. 16, pp. 60-68, June 2018

  49. M. C. Gursoy, A. E. Pusane, and T. Tuğcu, “Molecule-as-a-frame: A frame based communication approach for nanonetworks,” Nano Communication Networks, vol. 16, pp. 45-59, June 2018

  50. G. Genc, A. E. Pusane, T. Tuğcu, and Y. E. Kara, “Reception Modeling of sphere-to-sphere molecular communication via diffusion,” Nano Communication Networks, vol. 16, pp. 69-80, June 2018

  51. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “Optimal reception delay in diffusion-based molecular communication,” IEEE Communications Letters, vol. 22, no. 1, pp. 57-60, Jan. 2018

  52. E. Afacan, G. Dündar, A. E. Pusane, M. B. Yelten, and F. Başkaya, “Aging signature properties and an efficient signature determination tool for online monitoring,” Integration, the VLSI Journal, vol. 58, no. 1, pp. 496-503, June 2017

  53. Ü. Güler, A. E. Pusane, and G. Dündar, “Design of Efficient CMOS Ring-Oscillator-Based Random Number Generator,” International Journal of Electronics, vol. 104, no. 9, pp. 1465–1482, 2017

  54. B. C. Akdeniz, B. Tepekule, A. E. Pusane, and T. Tuğcu, “Novel network coding approaches for diffusion-based molecular nanonetworks,” Transactions on Emerging Telecommunications Technologies, vol. 28, no. 7, pp. 1-7, July 2017

  55. İ. Çiçek, A. E. Pusane, and G. Dündar, “An integrated dual entropy core true random number generator,” IEEE Trans. Circuits and Systems II, vol. 64, no. 3, pp. 329-333, Mar. 2017

  56. N. Ul-Hassan, A. E. Pusane, M. Lentmaier, G. P. Fettweis, and D. J. Costello, Jr., “Non-uniform window decoding schedules for spatially coupled LDPC codes,” IEEE Transactions on Communications, vol. 65, no. 2, pp. 510, Feb. 2017

  57. E. Afacan, G. Berkol, G. Dündar, A. E. Pusane, and F. Başkaya, “A lifetime-aware analog circuit sizing tool,” Integration, the VLSI Journal, vol. 55, no. 1, pp. 349-356, Sep. 2016

  58. E. Afacan, G. Berkol, G. Dündar, A. E. Pusane, and F. Başkaya, “An analog circuit synthesis tool based on efficient and reliable yield estimation,” Microelectronics Journal, vol. 54, pp. 14-22, Aug. 2016

  59. D. G. M. Mitchell, M. Lentmaier, A. E. Pusane, and D. J. Costello, Jr., “Randomly punctured LDPC codes,” IEEE Journal on Selected Areas in Communications, vol. 34, no. 2, pp. 408-421, Feb. 2016

  60. G. Kömürcü, A. E. Pusane, and G. Dündar, “Effects of aging and compensation mechanisms in ordering based RO-PUFs,” Integration, the VLSI Journal, vol. 52, no. 1, pp. 71-76, Jan. 2016

  61. B. Tepekule, A. E. Pusane, M. S. Kuran, and T. Tuğcu, “A novel pre-equalization method for molecular communication via diffusion in nanonetworks,” IEEE Communications Letters, vol. 19, no. 8, pp. 1311-1314, Aug. 2015

  62. B. Tepekule, A. E. Pusane, H. B. Yılmaz, C.-B. Chae, and T. Tuğcu, “ISI mitigation techniques in molecular communication,” IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 1, no. 2, pp. 202-216, June 2015.

  63. G. Kömürcü, A. E. Pusane, and G. Dündar, “Enhanced challenge-response set and secure usage scenarios for ordering based RO-PUFs,” IET Circuits, Devices, and Systems, vol. 9, no. 2, pp. 87-95, March 2015

  64. G. Kömürcü, A. E. Pusane, and G. Dündar, “An efficient grouping method and error probability analysis for RO-PUFs,” Computers & Security, vol. 49, pp. 123-131, March 2015

  65. A. Sariduman, A. E. Pusane, and Z. C. Taskin, “An integer programming-based search technique for error-prone structures of LDPC codes,” AEU - International Journal of Electronics and Communications, vol. 68, No. 11, pp. 1097-1105, Nov. 2014

  66. İ. Çiçek, A. E. Pusane, and G. Dündar, “A new dual entropy core true random number generator,” Analog Integrated Circuits and Signal Processing, vol. 81, No. 1, pp. 61-70, Oct. 2014 (invited paper)

  67. B. Şerbetçi and A. E. Pusane, “Practical polar code construction using generalised generator matrices,” IET Communications, vol. 8, no. 4, pp. 419-426, March 2014

  68. İ. Çiçek, A. E. Pusane, and G. Dündar, “A novel design method for discrete time chaos based true random number generators,” Integration, the VLSI Journal, vol. 47, no. 1, pp. 38-47, Jan. 2014

  69. G. Kömürcü, A. E. Pusane, and G. Dündar, "A ring oscillator based PUF implementation on FPGA," IU-Journal of Electrical and Electronics Engineering, vol. 13, no. 2, pp. 1647-1652, 2013

  70. R. Ashrafi and A. E. Pusane, “Spatially-coupled communication system for the correlated erasure channel,” IET Communications, vol. 7, no. 8, pp. 755-765, May 2013

  71. D. G. M. Mitchell, A. E. Pusane, and D. J. Costello, Jr., “Minimum distance and trapping set analysis of protograph-based LDPC convolutional codes,” IEEE Trans. Inform. Theory, vol. IT-59, no. 1, pp. 254 – 281, Jan. 2013

  72. A. E. Pusane, R. Smarandache, P. O. Vontobel, and D. J. Costello, Jr., “Deriving good LDPC convolutional codes from LDPC block codes,” IEEE Trans. Inform. Theory, vol. IT-57, no. 2, pp. 835 – 857, Feb. 2011

  73. R. Smarandache, A. E. Pusane, P. O. Vontobel, and D. J. Costello, Jr., “Pseudo-codeword performance analysis of LDPC convolutional codes,” IEEE Trans. Inform. Theory, vol. IT-55, no. 6, pp. 2577–2598, Jun. 2009

  74. K. Sh. Zigangirov, A. E. Pusane, D. K. Zigangirov, and D. J. Costello, Jr., “On the error correcting capability of LDPC codes,” Problems of Information Transmission (Problemy Peredachy Informatsii), vol. 44, no. 3, pp. 50–62, Sep. 2008

  75. A. E. Pusane, A. Jimenez-Feltström, A. Sridharan, M. Lentmaier, K. Sh. Zigangirov, and D. J. Costello, Jr., “Implementation aspects of LDPC convolutional codes,” IEEE Trans. Commun., vol. 56, no. 7, pp. 1060–1069, Jul. 2008

  76. S. Bates, Z. Chen, L. Gunthorpe, A. E. Pusane, K. Sh. Zigangirov, and D. J. Costello, Jr., “A low-cost serial decoder architecture for low-density parity-check convolutional codes,” IEEE Trans. Circuits and Systems I, vol. 55, no. 7, pp. 1967–1976, Aug. 2008

  77. E. Panayırcı, Ü. Aygölü, and A. E. Pusane, “Sequence estimation with transmit diversity for wireless communications,” AEÜ Int. Journal on Electronics and Communications, vol. 57, pp. 309–316, Sep. 2003

International conference papers

  1. O. K. Ülger, M. Ö. Demir, O. A. Topal, G. Karabulut Kurt, and A. E. Pusane, “An efficient physical layer spoofing detection with autoregressive model,” in Proc. International Conference on Telecommunications and Signal Processing, Milan, Italy, July 2020 (online)

  2. R. Yılmaz and A. E. Pusane, “Deep learning-based automatic modulation classification in the case of carrier phase shift,” in Proc. International Conference on Telecommunications and Signal Processing, Milan, Italy, July 2020 (online)

  3. M. C. Kardaş and A. E. Pusane, “An envelope-based feature for NDA SNR estimation,” in Proc. International Conference on Telecommunications and Signal Processing, Milan, Italy, July 2020 (online)

  4. M. Ö. Demir, G. Karabulut Kurt, and A. E. Pusane, “On the limitations of GPS time-spoofing attacks,” in Proc. International Conference on Telecommunications and Signal Processing, Milan, Italy, July 2020 (online)

  5. M. Y. Yağan, R. Kisacık, T. Erkınacı, A. E. Pusane, M. Uysal, T. Baykaş, G. Dündar, and A. D. Yalçınkaya, “Experimental validation of a novel RLL code for visible light communication,” in Proc. International Conference on Telecommunications and Signal Processing, Milan, Italy, July 2020 (online)

  6. M. G. Durmaz, A. Dilmac, B. Çamlı, E. Gençtürk, Z. C. Canbek Ozdil, A. E. Pusane, A. D. Yalçınkaya, K. Ülgen, and T. Tugcu, “Preliminary studies on flow assisted propagation of fluorescent microbeads in microfluidic channels for molecular communication systems,” in Proc. EAI International Conference on Bio-inspired Information and Communications Technologies, Shanghai, China, July 2020 (online)

  7. M. O. Demir, O. A. Topal, G. Dartmann, A. Schmeink, G. H. Ascheid, G. Karabulut Kurt, and A. E. Pusane, “Using perfect codes in relay aided networks: A security analysis,” in Proc. International Conference on Wireless and Mobile Computing, Networking and Communications, Barcelona, Spain, October 2019

  8. A. Çelik, M. C. Gürsoy, E. Başar, A. E. Pusane, and T. Tuğcu, “A low-complexity solution to angular misalignments in molecular index modulation,” in Proc. IEEE 30th Annual International Symposium on Personal, Indoor and Mobile Radio Communications, Istanbul, Turkey, September 2019

  9. O. A. Topal, M. O. Demir, G. Dartmann, A. Schmeink, G. Ascheid, A. E. Pusane, and G. Karabulut Kurt, “Physical layer spoofing against eavesdropping attack,” in Proc. Mediterranean Conference on Embedded Computing, Budva, Montenegro, June 2019

  10. M. C. Gürsoy, E. Başar, A. E. Pusane, and T. Tuğcu, “An ILI mitigating modulation scheme for molecular MIMO communications,” in Proc. International Conference on Telecommunications and Signal Processing, Budapest, Hungary, July 2019

  11. M. C. Gürsoy, H. B. Yılmaz, A. E. Pusane, and T. Tuğcu, “Performance enhancement of diffusive molecular communications with an apertured plane," in Proc. 4th Workshop on Molecular Communications, Linz, Austria, April 2019

  12. R. D. Aksoy, H. B. Yılmaz, M. S. Kuran, A. Wipat, A. E. Pusane, G. Mısırlı, and T. Tuğcu, “Receiver design using genetic circuits in molecular communication," in Proc. 4th Workshop on Molecular Communications, Linz, Austria, April 2019

  13. M. O. Demir, G. K. Kurt, G. Dartmann, G. Ascheid, and A. E. Pusane, “Security analysis of forward error correction codes in relay aided networks,” in Proc. Global Information Infrastructure and Networking Symposium, Thessaloniki, Greece, October 2018

  14. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “A network coding approach for multi-hop nanonetworks in molecular communication," in Proc. International Symposium on Wireless Communication Systems, Lisbon, Portugal, August 2018

  15. B. Kabakulak, Z.C. Taşkın, and A. E. Pusane, “LDPC kodlarının eniyi kod çözümü için dal-fiyatlandır-ve-kesi algoritması,” in Proc. Operations Research and Industrial Engineering Congress, Eskisehir, Turkey, June 2018

  16. Y. Sabucu, A. E. Pusane, and G. Karabulut Kurt, “Trust-based stable matching approach for carrier aggregated heterogeneous networks,” in Proc. International Conference on Telecommunications and Signal Processing, Athens, Greece, July 2018

  17. C. Gürsoy, B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “Error probability calculation with reduced complexity for molecular communications,” in Proc. International Conference on Telecommunications and Signal Processing, Athens, Greece, July 2018

  18. I. C. Odabaşı, M. B. Yelten, E. Afacan, F. Başkaya, A. E. Pusane, and G. Dündar, “A rare event based yield estimation methodology for analog circuits," in Proc. 21st IEEE Symposium on Design and Diagnostics of Electronic Circuits and Systems, Budapest, Hungary, April 2018

  19. B. C. Akdeniz, H. B. Yılmaz, A. E. Pusane, and T. Tuğcu, “Impulse response of 3-D molecular communication via diffusion and flow channel with an absorbing receiver," in Proc. 3rd Workshop on Molecular Communications, Ghent, Belgium, April 2018

  20. B. C. Akdeniz, C. Gürsoy, A. E. Pusane, and T. Tuğcu, “On the performance of the modulation Methods in time-varying molecular communication channels," in Proc. International Conference on Telecommunications and Signal Processing, Barcelona, Spain, July 2017

  21. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “2-D channel transfer function for molecular communication with an absorbing receiver," in Proc. IEEE Symposium on Computers and Communications, Crete, Greece, July 2017

  22. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “Two-way communication systems in molecular communication," in Proc. IEEE Intl. Black Sea Conference on Communications and Networking, Istanbul, Turkey, June 2017

  23. C. Gürsoy, A. E. Pusane, and T. Tuğcu, “Throughput optimization for molecule-as-a-frame communications," in Proc. IEEE Intl. Black Sea Conference on Communications and Networking, Istanbul, Turkey, June 2017

  24. D. J. Costello, Jr., D. G. M. Mitchell, A. E. Pusane, and M. Lentmaier, “On the finite-length scaling behavior of spatially coupled LDPC codes," in Proc. Information Theory and Applications Workshop, San Diego, CA, USA, Feb. 2017

  25. O. Calik, U. Iricioglu, G. Karabulut Kurt, A. E. Pusane, A. S. Demiroglu, G. Kayık, “Impact of retransmissions on the quality of experience in VoIP systems,” in Proc. Conference on Electrical and Electronics Engineering (ELECO), Bursa, Turkey, Nov. 2016

  26. D. G. M. Mitchell, A. E. Pusane, M. Lentmaier, and D. J. Costello, Jr., “On the block error rate performance of spatially coupled LDPC codes for streaming applications," in Proc. IEEE Information Theory Workshop, Cambridge, UK, Sept. 2016

  27. E. Afacan, G. Dündar, A. E. Pusane, F. Başkaya, and M. B. Yelten, “Efficient signature selection tool for sense & react systems,” in Proc. International Conference on Synthesis, Modeling, Analysis and Simulation Methods and Applications to Circuit Design (SMACD), Lisbon, Portugal, June 2016

  28. E. Afacan, G. Dündar, A. E. Pusane, and F. Başkaya, “Semi-empirical aging model development via accelerated aging test,” in Proc. International Conference on Synthesis, Modeling, Analysis and Simulation Methods and Applications to Circuit Design (SMACD), Lisbon, Portugal, June 2016

  29. T. Guzel, A. E. Pusane, and H. Deliç, “Generalized Gaussian distribution-based LDPC receiver for power-line communications,” in Proc. IEEE AFRICON, Addis Ababa, Ethiopia, Sept. 2015

  30. E. Afacan, G. Berkol, G. Dündar, A. E. Pusane, and F. Başkaya, “A deterministic aging simulator and an analog circuit sizing tool robust to aging phenomena,” in Proc. International Conference on Synthesis, Modeling, Analysis and Simulation Methods and Applications to Circuit Design (SMACD), Istanbul, Turkey, Sept. 2015

  31. H. B. Yılmaz, C.-B. Chae, B. Tepekule, and A. E. Pusane, ”Arrival modeling and error analysis for molecular communication via diffusion with drift,” in Proc. ACM International Conference on Nanoscale Computing and Communication, Boston, Massachusetts, USA, Sept. 2015

  32. G. Kömürcü, A. E. Pusane, and G. Dündar, “Implementation and Comparison of Conventional and Ordering Based RO-PUFs for Secret Key Generation," in Proc. International Conference on Advances in Circuits, Electronics and Micro-electronics, Venice, Italy, August 2015

  33. R. Ashrafi, A. E. Pusane, and I. Demirkan, “On the reliability and efficiency of novel programming architectures for next-generation Flash memories,” in Proc. International Conference on Telecommunications and Signal Processing, Prague, Czech Republic, July 2015

  34. D. G. M. Mitchell, M. Lentmaier, A. E. Pusane, and D. J. Costello, Jr., “Approximating decoding thresholds of punctured LDPC code ensembles on the AWGN channel," in Proc. IEEE Intl. Symposium on Inform. Theory, Hong Kong, June 2015

  35. G. Berkol, A. Unutulmaz, E. Afacan, G. Dündar, F. V. Fernandez, A. E. Pusane, and F. Başkaya, “A two-step layout-in-the-loop design automation tool," in Proc. IEEE International NEW Circuits And Systems Conference, Grenoble, France, June 2015

  36. G. Kömürcü, A. E. Pusane, and G. Dündar, “On the application and comparison of conventional and ordering-based RO-PUFs," in Proc. International Symposium on Digital Forensics and Security, Ankara, Turkey, May 2015

  37. G. Berkol, E. Afacan, G. Dündar, A. E. Pusane, and F. Başkaya, “A novel yield aware multi-objective analog circuit optimization tool,” in Proc. IEEE Symposium on Circuits and Systems, Lisbon, Portugal, May 2015

  38. E. Afacan, G. Berkol, G. Dündar, A. E. Pusane, and F. Başkaya, “A hybrid quasi Monte Carlo method for yield aware analog circuit sizing tool,” in Proc. Design, Automation and Test in Europe (DATE), Grenoble, France, March 2015

  39. E. Afacan, G. Berkol, A. E. Pusane, G. Dündar, and F. Başkaya, “Adaptive sized quasi-Monte Carlo based yield aware analog circuit optimization tool,” in Proc. European Workshop on CMOS Variability, Palma de Mallorca, Spain, Sept. 2014

  40. D. G. M. Mitchell, M. Lentmaier, A. E. Pusane, and D. J. Costello, Jr., “Randomly punctured spatially coupled LDPC codes,” in Proc. Intl. Symposium on Turbo Codes and Related Topics, Bremen, Germany, Aug. 2014 (invited paper)

  41. R. Ashrafi, A. Sariduman, and A. E. Pusane, “Asymptotic and finite-length performance of irregular spatially-coupled codes,” in Proc. IEEE Intl. Black Sea Conference on Communications and Networking, Chisinau, Moldova, May 2014

  42. B. Tepekule, A. E. Pusane, H. B. Yilmaz, T. Tuğcu, “Energy efficient ISI mitigation for communication via diffusion,” in Proc. IEEE Intl. Black Sea Conference on Communications and Networking, Chisinau, Moldova, May 2014

  43. G. Kömürcü, G. Dündar, and A. E. Pusane, “Robust RO-PUFs with Enhanced Challenge-Response Set,” in Proc. Intl. Conf. on Electrical Engineering/Electronics, Computer, Telecommunications and Information Technology (ECTI-CON), Nakhon Ratchasima, Thailand, May 2014

  44. Ü. Güler, A. E. Pusane, and G. Dündar, “Investigating flicker noise effect on randomness of CMOS ring oscillator based true random number generator,” in Proc. International Conference on Information Science, Electronics and Electrical Engineering Hokkaido, Japan, April 2014

  45. N. Ul Hassan, A. E. Pusane, M. Lentmaier, G. Fettweis, and D. J. Costello, Jr., “Non-uniform windowed decoding schedules for spatially coupled codes,” in Proc. GLOBECOM, Atlanta, GA, USA, Dec. 2013

  46. İ. Çiçek, A. E. Pusane, and G. Dündar, “A novel dual entropy core true random number generator,” in Proc. Conference on Electrical and Electronics Engineering (ELECO), Bursa, Turkey, Nov. 2013

  47. G. Kömürcü, A. E. Pusane, and G. Dündar, “Analysis of ring oscillator structures to develop a design methodology for RO-PUF circuits,” in Proc. IEEE International Conference on Very Large Scale Integration, Istanbul, Turkey, Oct. 2013

  48. G. Kömürcü, A. E. Pusane, and G. Dündar, “Dynamic programming based grouping method for RO-PUFs,” in Proc. PRIME 2013, Villach, Austria, June 2013

  49. R. Ashrafi and A. E. Pusane, “A spatially-coupled communication system for the correlated erasure channel,” in Proc. International Symposium on Signals, Systems and Electronics, Potsdam, Germany, Oct. 2012.

  50. R. Ashrafi and A. E. Pusane, “On the asymptotic performance of spatially-coupled codes with minimal coupling,” in Proc. International Symposium on Signals, Systems and Electronics, Potsdam, Germany, Oct. 2012.

  51. N. Ul Hassan, A. E. Pusane, M. Lentmaier, G. Fettweis, and D. J. Costello, Jr., “Reduced complexity decoding schedules for coupled LDPC codes,” in Proc. IEEE Information Theory Workshop, Lausanne, Switzerland, Sept. 2012 (invited paper)

  52. B. Şerbetçi and A. E. Pusane, “Finite-length polarization measures for polar coded systems,” in Proc. IEEE International Workshop on Signal Processing Advances in Wireless Communications, Izmir, Turkey, Jun. 2012

  53. D. G. M. Mitchell, A. E. Pusane, M. Lentmaier, and D. J. Costello, Jr., “Exact free distance and trapping set growth rates for LDPC convolutional codes,” in Proc. IEEE Intl. Symposium on Inform. Theory, St. Petersburg, Russia, Aug. 2011, pp. 1101–1105

  54. D. G. M. Mitchell, A. E. Pusane, and D. J. Costello, Jr., “Asymptotic trapping set analysis of regular protograph-based LDPC convolutional code ensembles,” in Proc. Information Theory and Applications Workshop, San Diego, CA, USA, Feb. 2009 (invited paper)

  55. D. G. M. Mitchell, A. E. Pusane, and D. J. Costello, Jr., “Trapping set analysis of protograph-based LDPC convolutional codes,” in Proc. IEEE Intl. Symposium on Inform. Theory, Seoul, Korea, Jun. 2009, pp. 561–565

  56. D. G. M. Mitchell, A. E. Pusane, N. Goertz, and D. J. Costello, Jr., “Free distance bounds for protograph based regular LDPC convolutional codes,” in Proc. Intl. Symposium on Turbo Codes and Related Topics, Lausanne, Switzerland, Sep. 2008

  57. D. G. M. Mitchell, A. E. Pusane, K. Sh. Zigangirov, and D. J. Costello, Jr., “Asymptotically good LDPC convolutional codes based on protographs,” in Proc. IEEE Intl. Symposium on Inform. Theory, Toronto, Canada, Jul. 2008, pp. 1030–1034

  58. D. J. Costello, Jr., A. E. Pusane, C. R. Jones, and D. Divsalar, “A comparison of ARA and protograph-based LDPC block and convolutional codes,” in Proc. Information Theory and Applications Workshop, San Diego, CA, USA, Jan. 2007 (invited paper)

  59. A. E. Pusane, R. Smarandache, P. O. Vontobel, and D. J. Costello, Jr., “On deriving good LDPC convolutional codes from QC LDPC block codes,” in Proc. IEEE Intl. Symposium on Inform. Theory, Nice, France, Jun. 2007, pp. 1221–1225

  60. D. J. Costello, Jr. and A. E. Pusane, “LDPC convolutional codes: What are they? how do they work? are they any good?” in Proc. AMS Joint Mathematics Meetings, New Orleans, LA, USA, Jan. 2007

  61. R. Smarandache, A. E. Pusane, P. O. Vontobel, and D. J. Costello, Jr., “Pseudo-codewords in LDPC convolutional codes,” in Proc. IEEE Intl. Symposium on Inform. Theory, Seattle, WA, USA, Jul. 2006, pp. 1364– 1368

  62. A. E. Pusane, K. Sh. Zigangirov, and D. J. Costello, Jr., “Construction of irregular LDPC codes with fast encoding property,” in Proc. IEEE Intl. Conference on Commun., Istanbul, Turkey, Jun. 2006

  63. D. J. Costello, Jr., A. E. Pusane, S. Bates, and K. Sh. Zigangirov, “A comparison between LDPC block and convolutional codes,” in Proc. Information Theory and Applications Workshop, San Diego, CA, USA, Feb. 2006 (invited paper)

  64. S. Bates, L. Gunthorpe, A. E. Pusane, Z. Chen, K. Sh. Zigangirov, and D. J. Costello, Jr., “Decoders for low-density parity-check convolutional codes with large memory,” in Proc. IEEE Symposium on Circuits and Systems, Kos, Greece, May 2006

  65. S. Bates, L. Gunthorpe, A. E. Pusane, Z. Chen, K. Sh. Zigangirov, and D. J. Costello, Jr., “Decoders for low-density parity-check convolutional codes with large memory,” in Proc. 12th NASA Symposium on VLSI Design, Coeur d’Alene, ID, USA, Oct. 2005

  66. A. E. Pusane, M. Lentmaier, T. E. Fuja, K. Sh. Zigangirov, and D. J. Costello, Jr., “Multilevel coding/modulation using LDPC convolutional codes,” in Proc. Intl. Symposium on Information Theory and its Applications, Parma, Italy, Oct. 2004, pp. 685–689

  67. A. E. Pusane, M. Lentmaier, K. Sh. Zigangirov, and D. J. Costello, Jr., “Reduced complexity decoding strategies for LDPC convolutional codes,” in Proc. IEEE Intl. Symposium on Inform. Theory, Chicago, IL, USA, Jun. 2004, p. 490

  68. E. Panayırcı, Ü. Aygölü, and A. E. Pusane, “EM-based sequence estimation for wireless systems with orthogonal transmit diversity,” in Proc. IEEE Intl. Conference on Commun., Anchorage, AL, USA, May 2003, pp. 3210–3214

  69. A. E. Pusane and Ü. Aygölü, “Power control for orthogonal space-time coding with multiple receive antennas,” in Proc. 13th International Symposium on Personal, Indoor and Mobile Radio Communications Conference, Lisbon, Portugal, Sep. 2002, pp. 95–99

  70. A. E. Pusane and Ü. Aygölü, “Space-time coded multiple MSK,” in Proc. 8th International Conference on Advances in Communications and Control, Crete, Greece, Jun. 2001, pp. 25–35

  71. A. E. Pusane, Ü. Aygölü, and İ. Altunbaş, “Performance analysis of trellis-coded MSK in two-ray fading channels,” in Proc. IEEE Balkan Conference on Signal Processing, Communications, Circuits and Systems, Istanbul, Turkey, Jun. 2000

National conference papers

  1. M. Pourmandi, S. S. Arslan, A. E. Pusane, E. Haytaoglu, and A. C. Tengiz, "Average bandwidth-cost v.s. storage trade-off for BS-assisted distributed storage networks," in Proc. IEEE Signal Processing and Communications Applications Conference, June 2021 (online)

  2. M. C. Kardaş and A. E. Pusane, “Blind non-data-aided signal-to-noise ratio estimation with convolutional neural networks,” in Proc. IEEE Signal Processing and Communications Applications Conference, Gaziantep, Turkey, October 2020 (online)

  3. R. Kisacık, T. Erkınacı, M. Y. Yağan, A. E. Pusane, M. Uysal, T. Baykaş, G. Dündar, and A. D. Yalçınkaya, “Opto-electronic receiver system with postequalization for visible light communications,” in Proc. IEEE Signal Processing and Communications Applications Conference, Gaziantep, Turkey, October 2020 (online)

  4. R. Ashrafi, Ş. Arslan, A. E. Pusane, “Kernel density estimation for optimal detection in all-bit-line MLC Flash memories," in Proc. IEEE Signal Processing and Communications Applications Conference, Sivas, Turkey, April 2019

  5. A. Zeshan, T. Baykaş, S. Erküçük, A. E. Pusane, “Hybrid MEMS-based molecular communication system," in Proc. IEEE Signal Processing and Communications Applications Conference, Sivas, Turkey, April 2019

  6. R. Kisacık, B. C. Efe, A. E. Pusane, M. Uysal, T. Baykaş, G. Dündar, A. D. Yalçınkaya, “Distance and power based experimental verification of channel model in visible light communication," in Proc. IEEE Signal Processing and Communications Applications Conference, Sivas, Turkey, April 2019

  7. M. O. Demir, G. Karabulut Kurt, G. Dartmann, G. Ascheid, and A. E. Pusane, “Security analysis of Hamming codes in relay aided networks,” in Proc. IEEE Signal Processing and Communications Applications Conference, Izmir, Turkey, May 2018

  8. M. C. Gursoy, A. E. Pusane, and T. Tugcu, “Superposition based molecular communications in nanomachine swarms,” in Proc. IEEE Signal Processing and Communications Applications Conference, Izmir, Turkey, May 2018

  9. A. O. Kislal, A. E. Pusane, and T. Tugcu, “A comparative analysis of channel coding for molecular communications,” in Proc. IEEE Signal Processing and Communications Applications Conference, Izmir, Turkey, May 2018

  10. R. Ashrafi, A. E. Pusane, and S. S. Arslan, “Next-generation data storage: transistor and DNA,” in Proc. IEEE Signal Processing and Communications Applications Conference, Izmir, Turkey, May 2018

  11. R. Ashrafi and A. E. Pusane, “An efficient equalization technique for multi-level cell Flash memory storage systems," in Proc. IEEE Signal Processing and Communications Applications Conference, Antalya, Turkey, May 2017

  12. C. Gürsoy, B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “On the effects of mobile transmitter and receiver on the performance of molecular communications system," in Proc. IEEE Signal Processing and Communications Applications Conference, Antalya, Turkey, May 2017

  13. B. C. Akdeniz, A. E. Pusane, and T. Tuğcu, “A novel concentration-type based modulation in molecular communication," in Proc. IEEE Signal Processing and Communications Applications Conference, Antalya, Turkey, May 2017

  14. B. Çamlı, A. D. Yalçınkaya, R. Kısacık, M. M. Maç, A. E. Pusane, T. Baykaş, and M. Uysal, “Application of standard CMOS photodiodes in optical communication systems," in Proc. IEEE Signal Processing and Communications Applications Conference, Antalya, Turkey, May 2017

  15. A. Sarıduman, A. E. Pusane, and Z. C. Taşkın, “A heuristic method for adaptive linear programming decoding," in Proc. IEEE Signal Processing and Communications Applications Conference, Zonguldak, Turkey, May 2016

  16. R. Ashrafi, A. E. Pusane, and I. Demirkan, “Analysis of advanced programming architectures for next-generation Flash memories,” in Proc. IEEE Signal Processing and Communication Applications Conference, Malatya, Turkey, May 2015

  17. Y. Sabucu, A. E. Pusane, and G. Karabulut Kurt, “Applications of stable matching algorithm in wireless communication systems,” in Proc. IEEE Signal Processing and Communication Applications Conference, Malatya, Turkey, May 2015

  18. B. C. Akdeniz, B. Tepekule, A. E. Pusane, T. Tuğcu, “Network coding applications in molecular communication,” in Proc. IEEE Signal Processing and Communication Applications Conference, Malatya, Turkey, May 2015

  19. A. Sariduman, A. E. Pusane, and Z. C. Taskin, “Adaptive linear programming for decoding LDPC codes,” in Proc. 22nd IEEE Signal Processing and Communication Applications Conference, Trabzon, Turkey, April 2014

  20. R. Ashrafi and A. E. Pusane, “Spatially-coupled coding based communication over the correlated Nakagami fading channel,” in Proc. 22nd IEEE Signal Processing and Communication Applications Conference, Trabzon, Turkey, April 2014

  21. B. Tepekule, A. E. Pusane, H. B. Yilmaz, T. Tuğcu, “A novel modulation technique in diffusion based molecular communication and its performance analysis,” in Proc. 22nd IEEE Signal Processing and Communication Applications Conference, Trabzon, Turkey, April 2014 (B. Tepekule received a best student paper award)

  22. R. Ashrafi and A. E. Pusane, “Performance analysis of spatially coupled codes over the correlated erasure channel,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2013

  23. M. S. Baltaoğlu, B. Önal, and A. E. Pusane, “Sudoku puzzle as an LDPC code,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2013

  24. B. Tepekule, U. Yavuz, and A. E. Pusane, “On the use of modern coding techniques in QR applications,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2013

  25. İ. Çiçek, A. E. Pusane, and G. Dündar, “Field programmable analog array implementation of logistic map,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2013

  26. İ. Çiçek, A. E. Pusane, and G. Dündar, “Random number generation using field programmable analog array implementation of logistic map,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2013

  27. G. Kömürcü, A. E. Pusane, and G. Dündar, “RO-based PUF implementation on an FPGA,” in Proc. Conference on Electrical and Electronics Engineering (ELECO), Bursa, Turkey, Nov. 2012.

  28. İ. Çiçek, A. E. Pusane, and G. Dündar, “A feasibility study of a 1D chaotic map for true random number generation,” in Proc. IEEE Signal Processing and Communications Applications Conference, Mugla, Turkey, Apr. 2012

  29. R. Ashrafi and A. E. Pusane, “Asymptotically regular spatially coupled codes with low decoding delay,” in Proc. IEEE Signal Processing and Communications Applications Conference, Mugla, Turkey, Apr. 2012

  30. B. Şerbetçi and A. E. Pusane, “On the selection of generator matrices for polar coded communication systems,” in Proc. IEEE Signal Processing and Communications Applications Conference, Mugla, Turkey, Apr. 2012

  31. A. Sarıduman, A. E. Pusane, and Z. C. Taskın, “An integer programming based trapping set search technique,” in Proc. IEEE Signal Processing and Communications Applications Conference, Mugla, Turkey, Apr. 2012

  32. A. E. Pusane, R. Smarandache, P. O. Vontobel, and D. J. Costello, Jr., “On the iterative decoding of LDPC convolutional codes,” in Proc. IEEE Signal Processing and Communications Applications Conference, Diyarbakır, Turkey, Apr. 2010, pp. 519–522

  33. A. E. Pusane and Ü. Aygölü, “Power control for orthogonal space-time coding with multiple receive antennas,” in Proc. IEEE Signal Processing and Communications Applications Conference, Denizli, Turkey, Jun. 2002, pp. 743–788 (best student paper award)

  34. A. E. Pusane, Ü. Aygölü, and E. Panayırcı, “Orthogonal space-time coded OFDM over correlated fading channels,” in Proc. IEEE Signal Processing and Communications Applications Conference, Denizli, Turkey, Jun. 2002, pp. 383–388

  35. A. E. Pusane and Ü. Aygölü, “Space-time coded multiple MSK modulation,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2001, pp. 312–317

  36. A. E. Pusane, Ü. Aygölü, and E. Panayırcı, “MSK modulated OFDM systems,” in Proc. IEEE Signal Processing and Communications Applications Conference, N. Cyprus, Apr. 2001, pp. 318–323